C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ring finger protein 220 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000355387  |
RNF220-001 |
ENSG00000187147 |
9606 | + |
1:44405194-44651723  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008SF | CIL_0008SF_0001 | VISTA | 1:43949748-44550457 |
| CIL_00093U | CIL_00093U_0001 | VISTA | 1:44224152-44825477 |
| CIL_0007OR | CIL_0007OR_0001 | UCNEbase | 1:44250002-44569572 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004842 | ISS | ubiquitin-protein transferase activity |
| GO:0005515 | IEA | protein binding |
| GO:0005737 | ISS | cytoplasm |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016567 | ISS | protein ubiquitination |
| GO:0016874 | IEA | ligase activity |
| GO:0051865 | ISS | protein autoubiquitination |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000030439
|
Rnf220-001 | protein_coding | Mus_musculus | 0 | 3125 |
|
ENSMUST00000138435
|
Rnf220-003 | processed_transcript | Mus_musculus | 0 | 1531 |
|
ENSMUST00000102690
|
Rnf220-006 | protein_coding | Mus_musculus | 0 | 1254 |
|
ENSMUST00000094853
|
Rnf220-002 | protein_coding | Mus_musculus | 0 | 1175 |
|
ENSMUST00000151829
|
Rnf220-010 | processed_transcript | Mus_musculus | 0 | 632 |
|
ENSMUST00000128122
|
Rnf220-009 | protein_coding | Mus_musculus | 0 | 603 |
|
ENSMUST00000150148
|
Rnf220-008 | processed_transcript | Mus_musculus | 0 | 355 |
|
ENSMUST00000133971
|
Rnf220-004 | processed_transcript | Mus_musculus | 2e-34 | 152 |
|
ENSMUST00000154974
|
Rnf220-005 | processed_transcript | Mus_musculus | 0.0000000000003 | 82 |
