C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynamin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355667 DNM2-001 ENSG00000079805 9606 + 19:10718163-10831895 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000355667
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000355667 11.667±0.00 11.792±0.00 8.750±0.00 19.473±0.00 12.802±10.49 11.246±0.00 20.026±0.00 22.247±10.35 24.178±3.66 16.735±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076W CIL_00076W_0002 CGP 19:10701430-10833488
CIL_000770 CIL_000770_0002 CGP 19:10718079-10836318

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 NAS G2/M transition of mitotic cell cycle
GO:0000139 TAS Golgi membrane
GO:0003924 IEA:NAS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA:NAS GTP binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005829 TAS cytosol
GO:0005874 IDA microtubule
GO:0005886 TAS plasma membrane
GO:0005925 IDA focal adhesion
GO:0006184 IEA GTP catabolic process
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0006897 NAS endocytosis
GO:0007165 NAS signal transduction
GO:0008017 NAS microtubule binding
GO:0008219 IEA cell death
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0019899 NAS enzyme binding
GO:0030666 TAS endocytic vesicle membrane
GO:0031623 IMP receptor internalization
GO:0033572 IMP transferrin transport
GO:0043065 NAS positive regulation of apoptotic process
GO:0044281 TAS small molecule metabolic process
GO:0045211 IDA postsynaptic membrane
GO:0045893 NAS positive regulation of transcription, DNA-templated
GO:0046209 TAS nitric oxide metabolic process
GO:0048489 NAS synaptic vesicle transport
GO:0050999 TAS regulation of nitric-oxide synthase activity
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115404 Dnm2-201 protein_coding Mus_musculus 0 3308
ENSMUST00000172482 Dnm2-008 protein_coding Mus_musculus 0 3280
ENSMUST00000091087 Dnm2-005 protein_coding Mus_musculus 0 3269
ENSMUST00000072362 Dnm2-004 protein_coding Mus_musculus 0 3197
ENSMUST00000173397 Dnm2-003 protein_coding Mus_musculus 0 3184
ENSMUST00000165766 Dnm2-001 protein_coding Mus_musculus 0 3177
ENSMUST00000174050 Dnm2-002 protein_coding Mus_musculus 0 2878
ENSMUST00000169194 Dnm2-007 processed_transcript Mus_musculus 0 1629
ENSMUST00000113365 Dnm1-001 protein_coding Mus_musculus 0 1629
ENSMUST00000139624 Dnm1-006 nonsense_mediated_decay Mus_musculus 0 1629
ENSMUST00000113350 Dnm1-004 protein_coding Mus_musculus 0 1629
ENSMUST00000113352 Dnm1-002 protein_coding Mus_musculus 0 1629
ENSMUST00000091089 Dnm1-005 protein_coding Mus_musculus 0 1602
ENSMUST00000078352 Dnm1-003 protein_coding Mus_musculus 0 1568
ENSMUST00000172763 Dnm2-006 retained_intron Mus_musculus 0 1530
ENSDART00000024031 dnm2a-001 protein_coding Danio_rerio 0 1506
ENSDART00000147972 dnm1a-001 protein_coding Danio_rerio 0 1415
ENSDART00000097330 dnm1b-201 protein_coding Danio_rerio 0 1253
ENSDART00000134261 dnm1b-001 protein_coding Danio_rerio 0 1227
ENSDART00000026535 dnm1a-201 protein_coding Danio_rerio 0 1225
ENSMUST00000070330 Dnm3-006 protein_coding Mus_musculus 0 1184
ENSMUST00000086074 Dnm3-001 protein_coding Mus_musculus 0 1157
ENSMUST00000173299 Dnm2-011 retained_intron Mus_musculus 0 904
ENSMUST00000172833 Dnm2-010 protein_coding Mus_musculus 0 604
ENSMUST00000161155 Dnm3-002 retained_intron Mus_musculus 0 516
ENSMUST00000129156 Dnm1-013 nonsense_mediated_decay Mus_musculus 0 503
ENSMUST00000174828 Dnm2-012 nonsense_mediated_decay Mus_musculus 0 453
ENSMUST00000156866 Dnm1-008 processed_transcript Mus_musculus 0 392
ENSMUST00000174243 Dnm2-009 processed_transcript Mus_musculus 0 329
ENSDART00000100171 DNM2 (1 of 2)-201 protein_coding Danio_rerio 0 305
ENSMUST00000139238 Dnm1-007 nonsense_mediated_decay Mus_musculus 7.9874e-44 183
ENSDART00000140280 dnm1b-002 processed_transcript Danio_rerio 2e-19 102

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