C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase D family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356508 PLD3-004 ENSG00000105223 9606 + 19:40348700-40378483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000356508
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000356508 2.937±0.00 24.611±0.00 2.687±0.00 34.158±0.00 23.108±0.00 8.468±2.30 15.669±8.62 3.173±0.00 48.140±38.13 74.097±40.59

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004630 IEA phospholipase D activity
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0006644 TAS phospholipid metabolic process
GO:0006655 TAS phosphatidylglycerol biosynthetic process
GO:0008152 IEA metabolic process
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0016042 IEA lipid catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0070062 IDA extracellular vesicular exosome
GO:0070290 IEA N-acylphosphatidylethanolamine-specific phospholipase D activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117611 Pld3-002 protein_coding Mus_musculus 0 1840
ENSMUST00000117095 Pld3-001 protein_coding Mus_musculus 0 1840
ENSMUST00000142981 Pld3-007 retained_intron Mus_musculus 0 621
ENSMUST00000127240 Pld3-004 protein_coding Mus_musculus 0 387
ENSMUST00000155287 Pld3-008 retained_intron Mus_musculus 0 346
ENSMUST00000150964 Pld3-006 protein_coding Mus_musculus 0 255
ENSMUST00000131106 Pld3-005 nonsense_mediated_decay Mus_musculus 9e-26 122

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