C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: L antigen family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357360 LAGE3-001 ENSG00000196976 9606 - X:154477769-154479257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357360
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357360 3.565±0.00 6.143±0.00 1.992±0.72 3.371±0.00 7.205±0.00 2.213±0.00 4.136±0.00 1.226±1.10 5.251±0.00 4.869±0.00 3.105±0.34 5.839±0.60 2.926±1.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LD CIL_0003LD_0001 CGP X:154458281-154479257
CIL_0006KI CIL_0006KI_0001 CGP X:154477769-154486670

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008033 IEA tRNA processing
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015433 Lage3-001 protein_coding Mus_musculus 0 215
ENSMUST00000180449 Gm6723-001 processed_pseudogene Mus_musculus 7.00649e-44 182
ENSMUST00000086601 Gm16391-001 processed_pseudogene Mus_musculus 1e-37 161
ENSMUST00000114152 Lage3-003 protein_coding Mus_musculus 8e-29 132
ENSMUST00000114153 Lage3-002 protein_coding Mus_musculus 8e-29 132

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