C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003LD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130827-ENSG00000196976 CGP 9606 X:154458281-154479257
GeneTranscriptPositionBiotype
ENSG00000130827 (PLXNA3)
plexin A3
ENST00000369682 (PLXNA3-001) 154458281-154473646 protein_coding
ENST00000467463 (PLXNA3-005) 154466419-154467175 processed_transcript
ENST00000478236 (PLXNA3-004) 154466091-154466765 retained_intron
ENST00000480645 (PLXNA3-006) 154468617-154468869 processed_transcript
ENST00000482598 (PLXNA3-009) 154464449-154464980 retained_intron
ENST00000491066 (PLXNA3-003) 154468661-154469350 retained_intron
ENST00000493546 (PLXNA3-007) 154469082-154470708 processed_transcript
ENST00000495040 (PLXNA3-008) 154458284-154461374 processed_transcript
ENST00000497802 (PLXNA3-002) 154470847-154472696 retained_intron
ENSG00000196976 (LAGE3)
L antigen family, member 3
ENST00000357360 (LAGE3-001) 154477769-154479257 protein_coding
ENST00000621786 (LAGE3-201) 154477773-154478912 protein_coding
ENSG00000279563 (CH17-340M24.1)
ENST00000623541 (CH17-340M24.1-001) 154477032-154477779 TEC
CIL_0003LD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031398-ENSMUSG00000015289 CGP 10090 X:74329066-74353618
GeneTranscriptPositionBiotype
ENSMUSG00000015289 (Lage3)
L antigen family, member 3
ENSMUST00000015433 (Lage3-001) 74352161-74353618 protein_coding
ENSMUST00000114152 (Lage3-003) 74352162-74353575 protein_coding
ENSMUST00000114153 (Lage3-002) 74351276-74353594 protein_coding
ENSMUSG00000031398 (Plxna3)
plexin A3
ENSMUST00000004326 (Plxna3-001) 74329066-74344689 protein_coding
ENSMUST00000136114 (Plxna3-003) 74329066-74332243 processed_transcript
ENSMUST00000137484 (Plxna3-009) 74341587-74343945 retained_intron
ENSMUST00000139323 (Plxna3-006) 74335232-74336336 retained_intron
ENSMUST00000142236 (Plxna3-004) 74333746-74334703 retained_intron
ENSMUST00000148726 (Plxna3-008) 74338349-74339159 retained_intron
ENSMUST00000152317 (Plxna3-007) 74338266-74339316 retained_intron
ENSMUST00000152376 (Plxna3-005) 74334326-74335839 retained_intron
ENSMUST00000154062 (Plxna3-002) 74332457-74344683 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LD_0001ENSG00000130827ENST00000369682ENST00000467463ENST00000478236ENST00000480645ENST00000482598ENST00000491066ENST00000493546ENST00000495040ENST00000497802ENSG00000196976ENST00000357360ENST00000621786ENSG00000279563ENST00000623541CIL_0003LD_0002ENSMUSG00000015289ENSMUST00000015433ENSMUST00000114152ENSMUST00000114153ENSMUSG00000031398ENSMUST00000004326ENSMUST00000136114ENSMUST00000137484ENSMUST00000139323ENSMUST00000142236ENSMUST00000148726ENSMUST00000152317ENSMUST00000152376ENSMUST00000154062
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LD_0001ENSG00000130827ENST00000369682ENST00000491066ENST00000495040ENST00000497802ENSG00000196976ENST00000357360ENST00000621786ENSG00000279563ENST00000623541CIL_0003LD_0002ENSMUSG00000015289ENSMUST00000015433ENSMUST00000114152ENSMUST00000114153ENSMUSG00000031398ENSMUST00000004326ENSMUST00000137484ENSMUST00000148726ENSMUST00000152376ENSMUST00000154062
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130827 ENST00000369682 1.019±0.00 1.844±0.00 0.092±0.00 1.472±0.00 1.877±1.15 2.051±1.53 1.098±0.00 0.849±0.79 0.317±0.00 2.367±1.47 0.577±0.49 8.956±5.99 2.543±0.23 2.600±0.11
ENST00000467463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491066 N/A N/A N/A N/A N/A N/A 0.539±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000493546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495040 N/A N/A N/A N/A N/A N/A 0.972±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000497802 N/A N/A N/A N/A N/A N/A N/A 0.724±0.00 N/A N/A 1.079±0.00 2.541±1.43 N/A N/A
ENSG00000196976 ENST00000357360 3.565±0.00 6.143±0.00 N/A 1.992±0.72 3.371±0.00 7.205±0.00 2.213±0.00 4.136±0.00 1.226±1.10 5.251±0.00 4.869±0.00 3.105±0.34 5.839±0.60 2.926±1.35
ENST00000621786 7.667±0.00 10.593±0.00 N/A 11.960±10.23 11.480±0.00 10.001±0.00 6.459±6.29 11.390±0.00 13.332±0.00 5.722±4.91 11.734±0.00 21.943±19.64 14.238±6.70 13.259±6.39
ENSG00000279563 ENST00000623541 N/A N/A N/A N/A 0.229±0.00 N/A N/A N/A N/A 0.535±0.04 N/A 0.624±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015289 ENSMUST00000015433 22.747±2.06 25.469±4.54 18.616±3.59 14.450±8.01 17.716±2.64 17.469±8.11 10.484±1.36 22.954±5.95 22.040±14.93 16.722±2.00 12.326±1.70 22.184±8.18 12.292±5.94 2.820±1.30
ENSMUST00000114152 N/A N/A N/A 1.740±0.00 2.410±0.00 N/A N/A N/A N/A N/A N/A 4.500±1.42 1.214±0.00 0.336±0.00
ENSMUST00000114153 N/A N/A N/A 0.238±0.00 0.755±0.00 N/A N/A N/A N/A N/A N/A 0.968±0.39 0.128±0.00 0.226±0.01
ENSMUSG00000031398 ENSMUST00000004326 4.081±2.64 3.625±0.94 1.965±0.05 28.748±19.26 4.310±1.08 2.534±0.42 0.233±0.17 0.720±0.36 0.604±0.46 1.789±0.14 0.103±0.07 8.945±3.05 0.606±0.43 0.206±0.06
ENSMUST00000136114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137484 N/A N/A N/A N/A N/A N/A 0.624±0.00 1.162±0.00 0.992±0.00 N/A 0.177±0.00 N/A N/A N/A
ENSMUST00000139323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.00
ENSMUST00000152317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152376 N/A N/A N/A N/A N/A N/A N/A N/A 0.324±0.06 N/A 0.102±0.00 N/A N/A N/A
ENSMUST00000154062 1.083±0.65 1.238±0.00 0.648±0.00 10.821±0.00 1.621±0.00 1.002±0.17 N/A 0.272±0.08 0.221±0.06 0.625±0.05 0.079±0.06 1.638±0.08 0.188±0.11 0.063±0.04

Loading