C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hemochromatosis
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357618 HFE-001 ENSG00000010704 9606 + 6:26087319-26098343 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastKidneyLungMuscleOvaryPlacentaTestisENST00000357618
Transcript ID Adrenal Bladder Brain Breast Kidney Lung Muscle Ovary Placenta Testis
ENST00000357618 0.294±0.00 0.126±0.00 0.107±0.07 1.514±0.00 0.459±0.32 0.185±0.00 0.029±0.00 0.855±0.09 0.816±0.14 0.365±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0005102 IPI receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005769 IDA early endosome
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006461 TAS protein complex assembly
GO:0006879 TAS cellular iron ion homeostasis
GO:0006955 IEA immune response
GO:0007565 IEA female pregnancy
GO:0010106 IEA cellular response to iron ion starvation
GO:0019882 IEA antigen processing and presentation
GO:0031410 IDA cytoplasmic vesicle
GO:0042446 IEA hormone biosynthetic process
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex
GO:0045177 IDA apical part of cell
GO:0045178 IDA basal part of cell
GO:0048471 IDA perinuclear region of cytoplasm
GO:0055037 IDA recycling endosome
GO:0055072 IEA iron ion homeostasis
GO:0060586 IEA multicellular organismal iron ion homeostasis
GO:0097459 IDA iron ion import into cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123555 Parp3-004 protein_coding Mus_musculus 0.0000000003 73
ENSMUST00000067218 Parp3-001 protein_coding Mus_musculus 0.0000000003 73
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.000002 60

Loading