C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly (ADP-ribose) polymerase family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123555 Parp3-004 ENSMUSG00000023249 10090 - 9:106470627-106476376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000123555
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000123555 9.500±4.02 9.292±2.17 1.502±0.00 4.489±0.35 5.670±0.00 4.600±0.50 2.780±0.40 2.319±0.70 7.335±1.49 17.958±3.00 5.729±0.00 1.577±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006302 IGI double-strand break repair
GO:0035861 IDA site of double-strand break

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265641 CPT1A-006 protein_coding Homo_sapiens 0.000000003 69
ENST00000315872 ROCK2-001 protein_coding Homo_sapiens 0.000000002 71
ENST00000322734 ZNF660-001 protein_coding Homo_sapiens 0.000000001 71
ENST00000332272 CHST6-003 protein_coding Homo_sapiens 0.000003 60
ENST00000357618 HFE-001 protein_coding Homo_sapiens 0.0000000003 73
ENST00000360954 HS3ST3B1-001 protein_coding Homo_sapiens 0.000000001 71
ENST00000366398 RP5-886K2.1-001 processed_pseudogene Homo_sapiens 0.00000003 64
ENST00000375147 NCBP1-001 protein_coding Homo_sapiens 0.0000002 64
ENST00000375218 UBR4-005 protein_coding Homo_sapiens 0.00000003 66
ENST00000398755 PARP3-001 protein_coding Homo_sapiens 0 1336
ENST00000417220 PARP3-002 protein_coding Homo_sapiens 0 1338
ENST00000427635 HERC4-010 nonsense_mediated_decay Homo_sapiens 0.000000001 71
ENST00000431474 PARP3-201 protein_coding Homo_sapiens 0 1336
ENST00000471971 PARP3-003 nonsense_mediated_decay Homo_sapiens 0 1336
ENST00000475782 PARP3-006 retained_intron Homo_sapiens 0 547
ENST00000476499 ARHGAP21-002 retained_intron Homo_sapiens 0.0000000003 71
ENST00000482294 CBX7-002 retained_intron Homo_sapiens 0.00000003 66
ENST00000486510 PARP3-008 processed_transcript Homo_sapiens 0 292
ENST00000497969 SUZ12P1-002 processed_transcript Homo_sapiens 0.0000000000003 81
ENST00000498510 PARP3-005 protein_coding Homo_sapiens 0 765
ENST00000513517 NUDT6-003 retained_intron Homo_sapiens 0.00000004 66
ENST00000575711 RPAIN-016 retained_intron Homo_sapiens 0.00000008 62
ENST00000595936 C10orf11-015 processed_transcript Homo_sapiens 0.00000004 62
ENST00000598067 FCHO1-014 protein_coding Homo_sapiens 0.0000000003 69
ENST00000598708 C10orf11-007 processed_transcript Homo_sapiens 0.00000004 62
ENST00000616279 ROCK2-201 protein_coding Homo_sapiens 0.000000001 71

Loading