C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358907 R3HDM2-201 ENSG00000179912 9606 - 12:57253765-57310463 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalKidneyOvaryPlacentaTestisENST00000358907
Transcript ID Adipose Adrenal Kidney Ovary Placenta Testis
ENST00000358907 4.452±0.00 3.945±0.00 4.191±0.00 3.182±1.13 3.712±0.00 6.461±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IEA nucleus
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164831 R3hdm2-002 protein_coding Mus_musculus 0 4054
ENSMUST00000169888 R3hdm2-004 protein_coding Mus_musculus 0 2784
ENSMUST00000105249 R3hdm2-006 protein_coding Mus_musculus 0 2784
ENSMUST00000164161 R3hdm2-008 nonsense_mediated_decay Mus_musculus 0 2763
ENSMUST00000064793 R3hdm2-003 protein_coding Mus_musculus 0 2241
ENSMUST00000105250 R3hdm2-202 protein_coding Mus_musculus 0 2237
ENSMUST00000077046 R3hdm2-201 protein_coding Mus_musculus 0 2237
ENSMUST00000105251 R3hdm2-005 protein_coding Mus_musculus 0 2237
ENSMUST00000170336 R3hdm2-007 protein_coding Mus_musculus 0 2237
ENSMUST00000166820 R3hdm2-001 protein_coding Mus_musculus 0 2237
ENSMUST00000191337 RP23-424A2.2-001 processed_pseudogene Mus_musculus 0 1339
ENSMUST00000171823 R3hdm2-018 processed_transcript Mus_musculus 0 551
ENSMUST00000168268 R3hdm2-015 retained_intron Mus_musculus 0 538
ENSMUST00000168079 R3hdm2-017 protein_coding Mus_musculus 0 525
ENSMUST00000171426 R3hdm2-016 protein_coding Mus_musculus 0 466
ENSMUST00000168780 R3hdm2-012 protein_coding Mus_musculus 0 372
ENSMUST00000164469 R3hdm2-014 retained_intron Mus_musculus 0 366
ENSMUST00000171434 R3hdm2-011 protein_coding Mus_musculus 0 235
ENSMUST00000165440 R3hdm2-019 protein_coding Mus_musculus 1.00053e-42 180
ENSMUST00000163794 R3hdm2-013 retained_intron Mus_musculus 3e-33 148
ENSMUST00000170164 R3hdm2-009 protein_coding Mus_musculus 3e-33 148

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