C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldo-keto reductase family 1, member B10 (aldose reductase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359579 AKR1B10-001 ENSG00000198074 9606 + 7:134527592-134541408 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359579
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359579 0.070±0.00 0.020±0.00 0.143±0.00 8.070±7.32 2.098±0.00 1.539±0.29 0.123±0.00 0.429±0.00 1.540±1.29 0.089±0.01 0.154±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GX CIL_0002GX_0001 CGP 7:134442350-134541408
CIL_0002GY CIL_0002GY_0001 CGP 7:134527592-134579875

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 TAS retinoid metabolic process
GO:0001758 IDA retinal dehydrogenase activity
GO:0004033 TAS aldo-keto reductase (NADP) activity
GO:0005515 IPI protein binding
GO:0005764 IEA lysosome
GO:0005829 TAS cytosol
GO:0006081 TAS cellular aldehyde metabolic process
GO:0007586 TAS digestion
GO:0007603 TAS phototransduction, visible light
GO:0008202 TAS steroid metabolic process
GO:0016488 IDA farnesol catabolic process
GO:0044597 IMP daunorubicin metabolic process
GO:0044598 IMP doxorubicin metabolic process
GO:0045550 IDA geranylgeranyl reductase activity
GO:0047718 IDA indanol dehydrogenase activity
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007449 Akr1b7-001 protein_coding Mus_musculus 0 861
ENSMUST00000038383 Akr1b10-001 protein_coding Mus_musculus 0 852
ENSMUST00000038406 Akr1b8-001 protein_coding Mus_musculus 0 841
ENSMUST00000139156 Akr1b10-002 nonsense_mediated_decay Mus_musculus 0 374
ENSMUST00000144384 Akr1b10-003 retained_intron Mus_musculus 0 374
ENSMUST00000115051 Akr1b10-004 protein_coding Mus_musculus 0.000000000000003 88

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