C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldo-keto reductase family 1, member B10 (aldose reductase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139156 Akr1b10-002 ENSMUSG00000061758 10090 + 6:34384281-34396947 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENSMUST00000139156
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000139156 29.988±12.36 5.244±0.00 3.036±0.00 7.935±0.00 3.258±0.00 3.317±0.00 0.877±0.31 1.716±0.00 5.611±2.56 0.857±0.31 0.813±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002GY CIL_0002GY_0002 CGP 6:34354119-34396950
CIL_0002GY CIL_0002GY_0003 CGP 6:34384218-34423142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285930 AKR1B1-001 protein_coding Homo_sapiens 0 265
ENST00000359579 AKR1B10-001 protein_coding Homo_sapiens 0 374
ENST00000423958 AKR1B15-201 protein_coding Homo_sapiens 0 281
ENST00000425765 AKR1B10P1-001 processed_pseudogene Homo_sapiens 0 678
ENST00000429105 AKR1B1P1-001 processed_pseudogene Homo_sapiens 0 222
ENST00000434222 AKR1B1-002 nonsense_mediated_decay Homo_sapiens 3e-20 104
ENST00000457545 AKR1B15-001 protein_coding Homo_sapiens 0 281
ENST00000465351 AKR1B1-003 retained_intron Homo_sapiens 3e-21 108
ENST00000467156 AKR1B15-002 retained_intron Homo_sapiens 0 346
ENST00000467251 AKR1B1-015 retained_intron Homo_sapiens 3e-26 122
ENST00000475559 AKR1B10-005 processed_transcript Homo_sapiens 0 374

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