C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SCY1-like 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360820 SCYL2-001 ENSG00000136021 9606 + 12:100267384-100341724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360820
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360820 3.272±0.00 1.177±0.00 3.259±0.00 1.271±0.00 4.169±0.59 3.988±1.63 1.622±0.93 5.635±0.96 3.221±0.28 3.166±1.14 0.527±0.16 1.776±0.92 2.313±0.58 2.379±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016J CIL_00016J_0002 CGP 12:100203669-100341724

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002092 IDA positive regulation of receptor internalization
GO:0004672 IEA protein kinase activity
GO:0005102 IPI receptor binding
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0006468 IEA protein phosphorylation
GO:0008333 IDA endosome to lysosome transport
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0031410 IEA cytoplasmic vesicle
GO:0090090 IDA negative regulation of canonical Wnt signaling pathway
GO:2000286 IDA receptor internalization involved in canonical Wnt signaling pathway
GO:2000370 IDA positive regulation of clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174252 Scyl2-001 protein_coding Mus_musculus 0 3613
ENSMUST00000092227 Scyl2-002 protein_coding Mus_musculus 0 3600
ENSMUST00000105294 Scyl2-003 processed_transcript Mus_musculus 0 1825
ENSMUST00000174492 Scyl2-004 protein_coding Mus_musculus 0 1127
ENSMUST00000173526 Scyl2-007 retained_intron Mus_musculus 0 582
ENSMUST00000174575 Scyl2-006 retained_intron Mus_musculus 0 525
ENSMUST00000174429 Scyl2-005 retained_intron Mus_musculus 0 294

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