C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: multivesicular body subunit 12B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361171 MVB12B-001 ENSG00000196814 9606 + 9:126326849-126507041 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361171
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361171 2.678±0.00 4.582±0.00 0.624±0.00 10.082±7.03 1.546±1.25 1.703±0.56 1.655±1.41 1.657±0.00 1.183±0.67 1.960±0.28 5.101±0.00 6.916±3.97 11.618±1.66 4.778±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LN CIL_0007LN_0001 UCNEbase 9:125397521-126491100
CIL_0008R2 CIL_0008R2_0001 VISTA 9:125807167-126408655
CIL_0007YU CIL_0007YU_0001 VISTA 9:125857395-126458153
CIL_00095V CIL_00095V_0001 VISTA 9:125882775-126484138
CIL_0007X9 CIL_0007X9_0001 VISTA 9:126036032-126639702
CIL_0008M0 CIL_0008M0_0001 VISTA 9:126136121-126738460

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000813 IDA ESCRT I complex
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005769 IDA early endosome
GO:0005770 IDA late endosome
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0008289 IMP lipid binding
GO:0015031 IEA protein transport
GO:0031982 IDA vesicle
GO:0042058 IMP regulation of epidermal growth factor receptor signaling pathway
GO:0043162 IC ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041555 Mvb12b-001 protein_coding Mus_musculus 0 1321
ENSMUST00000148660 Mvb12b-002 protein_coding Mus_musculus 0 702
ENSMUST00000146892 Mvb12b-003 processed_transcript Mus_musculus 0 363

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