C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 1 open reading frame 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000362076 C1orf43-004 ENSG00000143612 9606 - 1:154206720-154220619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonOvaryTestisENST00000362076
Transcript ID Adrenal Brain Breast Colon Ovary Testis
ENST00000362076 9.074±0.00 9.487±0.00 13.974±0.00 12.983±0.00 16.122±0.74 7.825±0.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068798 4933434E20Rik-003 protein_coding Mus_musculus 0 676
ENSMUST00000161918 4933434E20Rik-002 nonsense_mediated_decay Mus_musculus 0 514
ENSMUST00000160640 4933434E20Rik-001 protein_coding Mus_musculus 0 512
ENSMUST00000159064 4933434E20Rik-006 protein_coding Mus_musculus 0 512
ENSMUST00000168894 Gm7664-201 processed_pseudogene Mus_musculus 0 420
ENSMUST00000099450 Gm6478-201 processed_pseudogene Mus_musculus 0 398
ENSMUST00000162390 4933434E20Rik-010 retained_intron Mus_musculus 0 316
ENSMUST00000161874 4933434E20Rik-009 retained_intron Mus_musculus 0 278
ENSMUST00000162114 4933434E20Rik-005 protein_coding Mus_musculus 0 278
ENSMUST00000029552 4933434E20Rik-004 protein_coding Mus_musculus 0 278

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