C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serologically defined colon cancer antigen 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366541 SDCCAG8-001 ENSG00000054282 9606 + 1:243256056-243500092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000366541
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000366541 3.721±0.00 2.462±0.00 4.070±0.68 2.497±0.00 1.954±0.32 1.153±0.00 3.512±2.23 7.163±0.00 1.842±0.85 2.699±1.84 3.155±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L3 CIL_0000L3_0002 CGP 1:243124428-243500092
CIL_0006TO CIL_0006TO_0001 CGP 1:243256034-243851079

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005814 IDA centriole
GO:0005829 TAS cytosol
GO:0005911 IDA cell-cell junction
GO:0030010 ISS establishment of cell polarity
GO:0035148 ISS tube formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027785 Sdccag8-001 protein_coding Mus_musculus 0 1871
ENSMUST00000123409 Sdccag8-003 nonsense_mediated_decay Mus_musculus 0 1155
ENSMUST00000133305 Sdccag8-004 retained_intron Mus_musculus 0 809
ENSMUST00000150429 Sdccag8-002 retained_intron Mus_musculus 0 612
ENSMUST00000056773 Sdccag8-005 protein_coding Mus_musculus 0 435
ENSMUST00000139589 Sdccag8-006 processed_transcript Mus_musculus 0 333
ENSMUST00000019843 Akt3-002 protein_coding Mus_musculus 0.00000002 66

Loading