C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein/retinoic acid inducible neural-specific 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367462 BRINP3-001 ENSG00000162670 9606 - 1:190097662-190477629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000367462
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000367462 0.017±0.00 0.013±0.00 0.512±0.00 4.080±2.33 0.009±0.00 0.221±0.02 0.055±0.04 0.166±0.00 0.094±0.00 0.175±0.00 0.036±0.01 0.014±0.00 0.157±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005739 IEA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0007050 IEA cell cycle arrest
GO:0007399 IEA nervous system development
GO:0030425 IEA dendrite
GO:0043025 IEA neuronal cell body
GO:0045666 ISS positive regulation of neuron differentiation
GO:0045786 IEA negative regulation of cell cycle
GO:0045930 ISS negative regulation of mitotic cell cycle
GO:0071300 ISS cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074622 Brinp3-001 protein_coding Mus_musculus 0 3938
ENSMUST00000166814 Brinp3-201 protein_coding Mus_musculus 0 3814
ENSMUST00000128345 Brinp3-004 nonsense_mediated_decay Mus_musculus 0 3352
ENSMUST00000132847 Brinp3-003 protein_coding Mus_musculus 0 1173
ENSDART00000154639 BRINP3-001 protein_coding Danio_rerio 0 865
ENSDART00000086627 BRINP3-201 protein_coding Danio_rerio 0 833
ENSMUST00000125331 Brinp3-002 retained_intron Mus_musculus 0 460
ENSDART00000133224 brinp2-001 protein_coding Danio_rerio 6e-34 150
ENSDART00000056671 brinp2-201 protein_coding Danio_rerio 3e-32 145

Loading