C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein/retinoic acid inducible neural specific 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166814 Brinp3-201 ENSMUSG00000035131 10090 + 1:146497687-146902472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166814
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166814 0.148±0.01 0.075±0.01 0.458±0.03 4.212±0.90 0.118±0.03 0.027±0.01 0.008±0.00 0.031±0.02 0.011±0.01 0.030±0.00 0.008±0.00 0.368±0.33 0.024±0.02 1.255±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MQ CIL_0001MQ_0002 CGP 1:144752683-146902472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005576 IEA extracellular region
GO:0005739 IEA mitochondrion
GO:0007050 IEA cell cycle arrest
GO:0045666 IDA positive regulation of neuron differentiation
GO:0045930 IDA negative regulation of mitotic cell cycle
GO:0071300 IDA cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000133224 brinp2-001 protein_coding Danio_rerio 0 257
ENSDART00000056671 brinp2-201 protein_coding Danio_rerio 0 244
ENST00000367462 BRINP3-001 protein_coding Homo_sapiens 0 3814
ENST00000445957 BRINP3-003 protein_coding Homo_sapiens 0 207
ENST00000463404 BRINP3-004 processed_transcript Homo_sapiens 1e-35 152

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