C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein/retinoic acid inducible neural specific 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128345 Brinp3-004 ENSMUSG00000035131 10090 + 1:146497704-146902466 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyOvaryENSMUST00000128345
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Ovary
ENSMUST00000128345 0.245±0.01 0.073±0.00 0.177±0.09 0.061±0.03 0.005±0.00 0.011±0.00 0.483±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MQ CIL_0001MQ_0002 CGP 1:144752683-146902472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000133224 brinp2-001 protein_coding Danio_rerio 0 246
ENSDART00000056671 brinp2-201 protein_coding Danio_rerio 0 233
ENST00000367462 BRINP3-001 protein_coding Homo_sapiens 0 3352
ENST00000445957 BRINP3-003 protein_coding Homo_sapiens 0 207
ENST00000463404 BRINP3-004 processed_transcript Homo_sapiens 1e-35 152

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