C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin related protein 2/3 complex, subunit 5, 16kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367534 ARPC5-004 ENSG00000162704 9606 - 1:183623266-183635682 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000367534
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000367534 35.428±0.00 11.102±0.00 10.416±0.00 4.176±0.00 8.318±0.00 11.544±0.00 15.293±0.00 71.505±44.15 38.500±0.00 53.472±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005856 IEA cytoskeleton
GO:0005885 IEA Arp2/3 protein complex
GO:0015629 IEA actin cytoskeleton
GO:0030833 IEA regulation of actin filament polymerization
GO:0034314 IEA Arp2/3 complex-mediated actin nucleation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077755 Arpc5-001 protein_coding Mus_musculus 0 562
ENSMUST00000073088 Gm16372-201 protein_coding Mus_musculus 0 453
ENSMUST00000097536 Arpc5-003 protein_coding Mus_musculus 0 318
ENSMUST00000119412 Gm6500-001 processed_pseudogene Mus_musculus 0 316

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