C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 1 open reading frame 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368521 C1orf43-002 ENSG00000143612 9606 - 1:154206706-154220606 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368521
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368521 35.916±0.00 10.833±0.00 9.438±0.00 28.930±6.29 23.960±13.55 35.200±26.66 34.491±20.75 35.165±7.12 19.383±7.64 18.595±4.10 49.399±14.65 34.299±13.34 29.334±8.22 28.392±9.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160640 4933434E20Rik-001 protein_coding Mus_musculus 0 994
ENSMUST00000159064 4933434E20Rik-006 protein_coding Mus_musculus 0 994
ENSMUST00000168894 Gm7664-201 processed_pseudogene Mus_musculus 0 865
ENSMUST00000099450 Gm6478-201 processed_pseudogene Mus_musculus 0 822
ENSMUST00000162114 4933434E20Rik-005 protein_coding Mus_musculus 0 760
ENSMUST00000029552 4933434E20Rik-004 protein_coding Mus_musculus 0 760
ENSMUST00000161874 4933434E20Rik-009 retained_intron Mus_musculus 0 540
ENSMUST00000161918 4933434E20Rik-002 nonsense_mediated_decay Mus_musculus 0 514
ENSMUST00000068798 4933434E20Rik-003 protein_coding Mus_musculus 0 512
ENSMUST00000162390 4933434E20Rik-010 retained_intron Mus_musculus 0 316

Loading