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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tropomyosin 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000368533  |
TPM3-004 |
ENSG00000143549 |
9606 | - |
1:154155308-154183172  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001725 | IDA | stress fiber |
| GO:0003674 | ND | molecular_function |
| GO:0003779 | IEA | actin binding |
| GO:0005829 | TAS | cytosol |
| GO:0005856 | TAS | cytoskeleton |
| GO:0005862 | TAS | muscle thin filament tropomyosin |
| GO:0006928 | TAS | cellular component movement |
| GO:0006936 | TAS | muscle contraction |
| GO:0007165 | IEA | signal transduction |
| GO:0030049 | TAS | muscle filament sliding |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000029549
|
Tpm3-003 | protein_coding | Mus_musculus | 0 | 1317 |
|
ENSMUST00000072359
|
Tpm3-rs7-201 | protein_coding | Mus_musculus | 0 | 1312 |
|
ENSMUST00000062193
|
Tpm3-201 | protein_coding | Mus_musculus | 0 | 1110 |
|
ENSMUST00000119570
|
Tpm3-001 | protein_coding | Mus_musculus | 0 | 1110 |
|
ENSMUST00000118566
|
Tpm3-004 | protein_coding | Mus_musculus | 0 | 854 |
|
ENSMUST00000119158
|
Tpm3-005 | protein_coding | Mus_musculus | 0 | 830 |
|
ENSMUST00000131354
|
Tpm3-006 | retained_intron | Mus_musculus | 0 | 671 |
|
ENSMUST00000147430
|
Tpm3-011 | retained_intron | Mus_musculus | 0 | 671 |
|
ENSMUST00000121503
|
Tpm3-002 | protein_coding | Mus_musculus | 0 | 647 |
|
ENSMUST00000149432
|
Tpm3-007 | protein_coding | Mus_musculus | 0 | 466 |
|
ENSMUST00000133281
|
Tpm3-010 | retained_intron | Mus_musculus | 0 | 418 |
|
ENSMUST00000133361
|
Tpm3-013 | retained_intron | Mus_musculus | 0 | 412 |
|
ENSMUST00000149115
|
Tpm3-009 | retained_intron | Mus_musculus | 0 | 313 |
|
ENSMUST00000151798
|
Tpm3-012 | retained_intron | Mus_musculus | 0 | 287 |
|
ENSMUST00000149734
|
Tpm3-014 | retained_intron | Mus_musculus | 0 | 279 |
|
ENSMUST00000127955
|
Tpm3-008 | protein_coding | Mus_musculus | 0 | 220 |
|
ENSMUST00000143281
|
Tpm3-015 | retained_intron | Mus_musculus | 0 | 211 |
