C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ornithine aminotransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368845 OAT-001 ENSG00000065154 9606 - 10:124397307-124418936 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368845
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368845 17.733±0.00 16.681±0.00 8.804±0.00 36.700±7.40 17.518±9.15 18.932±6.85 7.029±4.05 19.431±0.01 18.599±10.00 16.530±8.58 7.347±0.00 22.860±11.71 17.561±8.55 19.567±12.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011M CIL_00011M_0001 CGP 10:124007666-124418976
CIL_00011N CIL_00011N_0001 CGP 10:124397303-124450184

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004587 EXP ornithine-oxo-acid transaminase activity
GO:0005739 TAS mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0007601 TAS visual perception
GO:0008483 IEA transaminase activity
GO:0008652 TAS cellular amino acid biosynthetic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0034214 IDA protein hexamerization
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055129 IEA L-proline biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084500 Oat-201 protein_coding Mus_musculus 0 1317
ENSMUST00000122186 Oat-rs1-001 processed_pseudogene Mus_musculus 0 974

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