C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00011N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000065154-ENSG00000229544 CGP 9606 10:124397303-124450184
GeneTranscriptPositionBiotype
ENSG00000065154 (OAT)
ornithine aminotransferase 		ENST00000368845 (OAT-001) 124397307-124418936 protein_coding
ENST00000467675 (OAT-004) 124401731-124408791 processed_transcript
ENST00000471127 (OAT-002) 124398021-124403336 processed_transcript
ENST00000476917 (OAT-007) 124407356-124418193 processed_transcript
ENST00000483711 (OAT-003) 124403845-124405929 processed_transcript
ENST00000490096 (OAT-006) 124408822-124415072 processed_transcript
ENST00000492376 (OAT-005) 124408893-124414436 processed_transcript
ENST00000539214 (OAT-201) 124397303-124418976 protein_coding
ENSG00000229544 (NKX1-2)
NK1 homeobox 2 		ENST00000451024 (NKX1-2-001) 124447023-124450184 protein_coding
ENSG00000269962 (RP13-238F13.5)
 ENST00000602332 (RP13-238F13.5-001) 124445239-124445775 lincRNA
ENSG00000271434 (RP13-238F13.3)
 ENST00000440536 (RP13-238F13.3-002) 124447152-124448510 retained_intron
ENST00000604581 (RP13-238F13.3-001) 124447713-124450048 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00011N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030934-ENSMUSG00000048528 CGP 10090 7:132557475-132599637
GeneTranscriptPositionBiotype
ENSMUSG00000030934 (Oat)
ornithine aminotransferase 		ENSMUST00000084500 (Oat-201) 132557475-132576398 protein_coding
ENSMUSG00000048528 (Nkx1-2)
NK1 transcription factor related, locus 2 (Drosophila) 		ENSMUST00000054562 (Nkx1-2-001) 132594878-132599637 protein_coding
ENSMUSG00000087657 (Gm16764)
predicted gene, 16764 		ENSMUST00000138891 (Gm16764-001) 132597387-132599637 antisense
ENSMUST00000148931 (Gm16764-003) 132597403-132599637 antisense
ENSMUST00000164986 (Gm16764-002) 132597387-132599637 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011N_0001ENSG00000065154ENST00000368845ENST00000467675ENST00000471127ENST00000476917ENST00000483711ENST00000490096ENST00000492376ENST00000539214ENSG00000229544ENST00000451024ENSG00000269962ENST00000602332ENSG00000271434ENST00000440536ENST00000604581CIL_00011N_0002ENSMUSG00000030934ENSMUST00000084500ENSMUSG00000048528ENSMUST00000054562ENSMUSG00000087657ENSMUST00000138891ENSMUST00000148931ENSMUST00000164986
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00011N_0001ENSG00000065154ENST00000368845ENST00000476917ENST00000539214ENSG00000229544ENST00000451024ENSG00000269962ENST00000602332ENSG00000271434ENST00000440536CIL_00011N_0002ENSMUSG00000030934ENSMUST00000084500ENSMUSG00000048528ENSMUST00000054562ENSMUSG00000087657ENSMUST00000138891ENSMUST00000148931ENSMUST00000164986
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065154 ENST00000368845 17.733±0.00 16.681±0.00 8.804±0.00 36.700±7.40 17.518±9.15 18.932±6.85 7.029±4.05 19.431±0.01 18.599±10.00 16.530±8.58 7.347±0.00 22.860±11.71 17.561±8.55 19.567±12.96
ENST00000467675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476917 N/A N/A 14.584±0.00 32.840±0.00 13.503±0.00 20.508±0.00 2.675±0.00 18.665±0.00 19.907±0.00 10.414±0.00 11.936±0.00 31.847±0.00 N/A N/A
ENST00000483711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539214 N/A 4.500±0.00 N/A N/A N/A 4.557±0.00 N/A 6.598±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000229544 ENST00000451024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A
ENSG00000269962 ENST00000602332 N/A N/A N/A 0.086±0.00 0.301±0.00 N/A N/A N/A N/A N/A N/A N/A 0.098±0.00 0.062±0.00
ENSG00000271434 ENST00000440536 N/A N/A N/A 0.313±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A
ENST00000604581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030934 ENSMUST00000084500 79.680±14.60 117.416±9.11 85.829±6.27 24.012±2.65 61.401±4.74 85.941±13.23 94.231±6.17 258.257±3.90 557.199±563.41 112.115±6.88 77.019±5.01 96.763±25.66 36.056±19.29 18.237±4.30
ENSMUSG00000048528 ENSMUST00000054562 0.035±0.03 N/A N/A 0.140±0.10 0.037±0.01 0.019±0.01 N/A 0.020±0.00 0.015±0.01 N/A N/A 0.020±0.01 0.005±0.00 0.036±0.01
ENSMUSG00000087657 ENSMUST00000138891 0.133±0.03 N/A N/A 0.280±0.00 0.167±0.06 0.225±0.17 N/A N/A 0.110±0.06 N/A N/A 0.208±0.09 N/A 0.493±0.27
ENSMUST00000148931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.278±0.00
ENSMUST00000164986 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.024±0.00 0.894±0.00

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