C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 1, with ZNF domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369089 PRDM1-002 ENSG00000057657 9606 + 6:106098940-106109939 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000369089
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000369089 1.302±0.00 0.052±0.00 0.335±0.00 0.151±0.00 0.216±0.00 0.344±0.00 1.836±0.00 0.566±0.26 1.017±0.00 0.280±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105490 Prdm1-002 protein_coding Mus_musculus 0 2874
ENSMUST00000039174 Prdm1-001 protein_coding Mus_musculus 0 2874
ENSMUST00000167340 Prdm1-003 processed_transcript Mus_musculus 0 370
ENSDART00000017445 prdm1a-001 protein_coding Danio_rerio 0 355

Loading