C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglycerate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369407 PHGDH-002 ENSG00000092621 9606 + 1:119719627-119744213 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000369407
Transcript ID Testis
ENST00000369407 4.741±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004617 IEA phosphoglycerate dehydrogenase activity
GO:0006564 IEA L-serine biosynthetic process
GO:0008152 IEA metabolic process
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065793 Phgdh-001 protein_coding Mus_musculus 0 1751
ENSMUST00000120430 AC118721.1-001 processed_pseudogene Mus_musculus 0 1707
ENSMUST00000178959 Gm7901-201 pseudogene Mus_musculus 0 1578
ENSMUST00000119183 Gm13337-001 processed_pseudogene Mus_musculus 0 1535
ENSMUST00000172364 Gm9252-001 processed_pseudogene Mus_musculus 0 1522
ENSMUST00000180647 Gm6756-001 processed_pseudogene Mus_musculus 0 1504
ENSMUST00000121036 Gm13730-001 processed_pseudogene Mus_musculus 0 1334
ENSMUST00000118988 Gm5385-001 processed_pseudogene Mus_musculus 0 1166
ENSMUST00000117850 Gm6024-001 processed_pseudogene Mus_musculus 0 1157
ENSMUST00000183069 Gm8793-001 processed_pseudogene Mus_musculus 0 1074
ENSMUST00000153694 Phgdh-003 retained_intron Mus_musculus 0 549
ENSMUST00000148488 Phgdh-002 protein_coding Mus_musculus 0 494

Loading