C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369429 TBX15-002 ENSG00000092607 9606 - 1:118883047-118987805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000369429
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000369429 7.778±0.00 0.556±0.00 0.189±0.00 8.173±0.00 0.421±0.00 0.236±0.18 0.098±0.00 0.346±0.00 26.432±13.94 0.044±0.00 0.452±0.00 0.866±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CA CIL_0008CA_0001 VISTA 1:118609935-119210971
CIL_0008QB CIL_0008QB_0001 VISTA 1:118677867-119281745
CIL_0007RV CIL_0007RV_0001 VISTA 1:118706148-119314384
CIL_00012O CIL_00012O_0002 CGP 1:118883046-119140671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029462 Tbx15-001 protein_coding Mus_musculus 0 3295
ENSMUST00000150756 Tbx15-003 processed_transcript Mus_musculus 0 785
ENSMUST00000151606 Tbx15-002 processed_transcript Mus_musculus 0 390
ENSDART00000103448 tbx18-001 protein_coding Danio_rerio 0 292
ENSDART00000126206 tbx18-201 protein_coding Danio_rerio 0 285

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