C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PDZ domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370215 PDZD7-003 ENSG00000186862 9606 - 10:101017332-101031133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000370215
Transcript ID Brain
ENST00000370215 1.265±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BD CIL_0008BD_0001 VISTA 10:100486833-101088338
CIL_0007U1 CIL_0007U1_0001 VISTA 10:100491715-101092615
CIL_000940 CIL_000940_0001 VISTA 10:100919065-101519843
CIL_0005ND CIL_0005ND_0001 CGP 10:100987367-101007836
CIL_0001C9 CIL_0001C9_0002 CGP 10:100996618-101031157
CIL_0005NG CIL_0005NG_0001 CGP 10:101007683-101041244

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005929 IDA cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169459 Pdzd7-201 protein_coding Mus_musculus 0 1681
ENSMUST00000145391 Pdzd7-001 protein_coding Mus_musculus 0 1681

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