C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: down-regulator of transcription 1, TBP-binding (negative cofactor 2)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370272 DR1-001 ENSG00000117505 9606 + 1:93345888-93369498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370272 3.437±0.00 4.467±0.00 2.706±0.00 3.228±0.10 3.642±0.04 3.500±0.16 0.982±0.00 3.379±0.00 3.461±0.00 4.649±0.00 1.819±1.09 2.956±0.24 2.740±0.59 5.307±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZW CIL_0005ZW_0001 CGP 1:93179919-93369498

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0003677 TAS DNA binding
GO:0003714 TAS transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006325 TAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0008134 TAS transcription factor binding
GO:0017025 IDA TBP-class protein binding
GO:0043565 IEA sequence-specific DNA binding
GO:0043966 IDA histone H3 acetylation
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031190 Dr1-001 protein_coding Mus_musculus 0 857
ENSMUST00000154862 Dr1-002 processed_transcript Mus_musculus 8e-33 148
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000009 66

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