C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005ZW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122483-ENSG00000117505 CGP 9606 1:93179919-93369498
GeneTranscriptPositionBiotype
ENSG00000117500 (TMED5)
transmembrane emp24 protein transport domain containing 5 		ENST00000370280 (TMED5-004) 93156040-93180261 protein_coding
ENST00000370282 (TMED5-001) 93149742-93180728 protein_coding
ENST00000370290 (TMED5-002) 93151858-93180516 nonsense_mediated_decay
ENST00000479918 (TMED5-005) 93154232-93180361 protein_coding
ENST00000483033 (TMED5-003) 93154196-93163210 processed_transcript
ENSG00000117505 (DR1)
down-regulator of transcription 1, TBP-binding (negative cofactor 2) 		ENST00000370267 (DR1-002) 93345935-93361168 protein_coding
ENST00000370272 (DR1-001) 93345888-93369498 protein_coding
ENST00000481583 (DR1-003) 93354975-93360935 processed_transcript
ENSG00000122483 (CCDC18)
coiled-coil domain containing 18 		ENST00000343253 (CCDC18-008) 93179919-93278477 protein_coding
ENST00000370276 (CCDC18-001) 93180724-93278730 protein_coding
ENST00000401026 (CCDC18-003) 93180363-93278607 protein_coding
ENST00000421014 (CCDC18-010) 93221665-93239473 processed_transcript
ENST00000447456 (CCDC18-005) 93254517-93264947 retained_intron
ENST00000448243 (CCDC18-006) 93180716-93186398 protein_coding
ENST00000455267 (CCDC18-004) 93205555-93246892 protein_coding
ENST00000479653 (CCDC18-007) 93180759-93193660 nonsense_mediated_decay
ENST00000481180 (CCDC18-002) 93180769-93216679 nonsense_mediated_decay
ENST00000528942 (CCDC18-009) 93179930-93186400 processed_transcript
ENSG00000225297 (RP4-612C19.2)
 ENST00000426104 (RP4-612C19.2-001) 93199755-93199939 processed_pseudogene
ENSG00000229567 (RP4-717I23.2)
 ENST00000423010 (RP4-717I23.2-001) 93278961-93279129 processed_pseudogene
ENSG00000237003 (RP4-612C19.1)
 ENST00000413542 (RP4-612C19.1-001) 93190740-93191060 processed_pseudogene
CIL_0005ZW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056531-ENSMUSG00000029265 CGP 10090 5:108132914-108280526
GeneTranscriptPositionBiotype
ENSMUSG00000029265 (Dr1)
down-regulator of transcription 1 		ENSMUST00000031190 (Dr1-001) 108268897-108280526 protein_coding
ENSMUST00000154862 (Dr1-002) 108276920-108278615 processed_transcript
ENSMUSG00000056531 (Ccdc18)
coiled-coil domain containing 18 		ENSMUST00000047677 (Ccdc18-201) 108132914-108232947 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ZW_0001ENSG00000117500ENST00000370280ENST00000370282ENST00000370290ENST00000479918ENST00000483033ENSG00000117505ENST00000370267ENST00000370272ENST00000481583ENSG00000122483ENST00000343253ENST00000370276ENST00000401026ENST00000421014ENST00000447456ENST00000448243ENST00000455267ENST00000479653ENST00000481180ENST00000528942ENSG00000225297ENST00000426104ENSG00000229567ENST00000423010ENSG00000237003ENST00000413542CIL_0005ZW_0002ENSMUSG00000029265ENSMUST00000031190ENSMUST00000154862ENSMUSG00000056531ENSMUST00000047677
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ZW_0001ENSG00000117500ENST00000370280ENST00000370282ENST00000370290ENST00000479918ENSG00000117505ENST00000370267ENST00000370272ENSG00000122483ENST00000343253ENST00000401026ENSG00000225297ENST00000426104ENSG00000229567ENST00000423010ENSG00000237003ENST00000413542CIL_0005ZW_0002ENSMUSG00000029265ENSMUST00000031190ENSMUSG00000056531ENSMUST00000047677
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000117500 ENST00000370280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.271±0.00 N/A
ENST00000370282 2.221±0.00 3.587±0.00 N/A N/A 4.236±0.00 3.493±0.19 2.183±1.29 8.851±0.00 7.373±0.00 4.199±0.00 4.269±0.00 2.793±0.35 1.753±0.55 N/A
ENST00000370290 10.839±0.00 5.127±0.00 6.156±0.00 8.704±4.44 10.368±4.06 9.179±2.42 5.724±3.53 15.843±8.28 11.153±5.83 9.745±2.26 9.976±6.62 5.382±1.05 7.666±2.32 9.461±0.00
ENST00000479918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.576±0.00 16.822±0.00 N/A
ENST00000483033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000117505 ENST00000370267 14.115±0.00 N/A N/A 8.165±0.00 N/A N/A 3.442±0.00 N/A 11.755±0.00 14.143±0.00 9.185±0.00 12.298±0.00 12.583±0.28 48.088±12.79
ENST00000370272 3.437±0.00 4.467±0.00 2.706±0.00 3.228±0.10 3.642±0.04 3.500±0.16 0.982±0.00 3.379±0.00 3.461±0.00 4.649±0.00 1.819±1.09 2.956±0.24 2.740±0.59 5.307±0.00
ENST00000481583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000122483 ENST00000343253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.183±0.00
ENST00000370276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000401026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.297±0.00
ENST00000421014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225297 ENST00000426104 N/A 0.120±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.260±0.00 N/A
ENSG00000229567 ENST00000423010 N/A 0.157±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 0.309±0.10 N/A 0.208±0.00
ENSG00000237003 ENST00000413542 N/A N/A 0.277±0.00 0.197±0.00 0.224±0.00 1.591±0.00 N/A N/A 0.535±0.00 N/A 0.041±0.00 N/A N/A 0.056±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029265 ENSMUST00000031190 11.799±2.41 41.586±7.67 11.651±1.76 10.553±6.39 22.098±13.33 19.179±1.33 5.520±0.68 14.047±2.94 12.557±4.59 18.550±3.45 5.401±0.27 23.429±9.82 10.105±4.35 29.087±11.73
ENSMUST00000154862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000056531 ENSMUST00000047677 0.029±0.03 N/A 0.046±0.03 0.245±0.15 0.041±0.00 0.050±0.01 N/A 0.022±0.01 0.406±0.45 0.035±0.02 0.010±0.00 1.091±1.05 1.001±0.60 6.204±7.92

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