C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370500 GTF2B-001 ENSG00000137947 9606 - 1:88852932-88891618 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370500
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370500 7.188±0.00 6.679±0.00 2.162±0.00 10.805±1.59 7.381±0.63 7.050±1.05 3.294±1.47 9.068±2.47 7.307±0.25 10.104±3.46 3.590±0.45 9.398±5.59 9.518±3.81 8.040±5.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001047 IEA core promoter binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0008134 IPI transcription factor binding
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0017025 IEA TBP-class protein binding
GO:0046966 IPI thyroid hormone receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029938 Gtf2b-201 protein_coding Mus_musculus 0 1415

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