C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of calcineurin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371374 RCAN2-002 ENSG00000172348 9606 - 6:46220738-46491362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371374 9.831±0.00 9.607±0.00 2.267±0.00 22.795±12.04 3.464±1.21 6.830±4.65 62.158±49.73 7.096±6.63 4.533±3.70 6.775±5.08 9.064±7.20 4.270±3.22 0.450±0.34 10.153±8.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YF CIL_0008YF_0001 VISTA 6:45752763-46354264
CIL_000084 CIL_000084_0002 CGP 6:46220736-46652830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005575 ND cellular_component
GO:0006979 IEA response to oxidative stress
GO:0007614 IEA short-term memory
GO:0019722 IEA calcium-mediated signaling
GO:0031987 IEA locomotion involved in locomotory behavior
GO:0033173 IEA calcineurin-NFAT signaling cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044895 Rcan2-202 protein_coding Mus_musculus 0 1206
ENSMUST00000044792 Rcan2-201 protein_coding Mus_musculus 0 891
ENSMUST00000177857 Rcan2-203 protein_coding Mus_musculus 0 795

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