C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase with thrombospondin type 1 motif, 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371929 ADAMTS13-001 ENSG00000160323 9606 + 9:133422000-133459386 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryPlacentaTestisENST00000371929
Transcript ID Lung Ovary Placenta Testis
ENST00000371929 0.125±0.00 0.515±0.00 0.101±0.00 0.315±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KH CIL_0000KH_0001 CGP 9:133376367-133418096
CIL_0006DF CIL_0006DF_0001 CGP 9:133406059-133459402
CIL_0006DA CIL_0006DA_0001 CGP 9:133414358-133470848

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IEA endopeptidase activity
GO:0004222 IEA metalloendopeptidase activity
GO:0005178 TAS integrin binding
GO:0005509 TAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005578 TAS proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0006508 IDA:IEA proteolysis
GO:0007160 NAS cell-matrix adhesion
GO:0007229 NAS integrin-mediated signaling pathway
GO:0008233 IEA peptidase activity
GO:0008237 TAS metallopeptidase activity
GO:0008270 TAS zinc ion binding
GO:0009100 NAS glycoprotein metabolic process
GO:0009636 IEA response to toxic substance
GO:0009986 NAS cell surface
GO:0016485 TAS protein processing
GO:0030168 NAS platelet activation
GO:0034341 IEA response to interferon-gamma
GO:0034612 IEA response to tumor necrosis factor
GO:0043171 IDA peptide catabolic process
GO:0070670 IEA response to interleukin-4

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102891 Adamts13-001 protein_coding Mus_musculus 0 1803
ENSMUST00000014996 Adamts13-002 protein_coding Mus_musculus 0 1803
ENSMUST00000128064 Ndufb2-003 retained_intron Mus_musculus 0.00009 55

Loading