C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102891 Adamts13-001 ENSMUSG00000014852 10090 + 2:26973493-27009628 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000102891
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000102891 0.006±0.00 0.012±0.01 0.096±0.07 0.378±0.00 0.099±0.03 1.173±0.82 0.165±0.05 0.056±0.03 0.155±0.00 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DF CIL_0006DF_0002 CGP 2:26953563-27009628
CIL_0006DA CIL_0006DA_0002 CGP 2:26973416-27021089

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IDA endopeptidase activity
GO:0004222 IEA metalloendopeptidase activity
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0006508 IDA proteolysis
GO:0007596 IEA blood coagulation
GO:0008233 IEA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0009636 IEA response to toxic substance
GO:0034341 IEA response to interferon-gamma
GO:0034612 IEA response to tumor necrosis factor
GO:0043171 IEA peptide catabolic process
GO:0070670 IEA response to interleukin-4

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355699 ADAMTS13-002 protein_coding Homo_sapiens 0 1803
ENST00000356589 ADAMTS13-003 protein_coding Homo_sapiens 0 1386
ENST00000371916 ADAMTS13-202 protein_coding Homo_sapiens 0 1387
ENST00000371929 ADAMTS13-001 protein_coding Homo_sapiens 0 1803
ENST00000474918 ADAMTS13-008 nonsense_mediated_decay Homo_sapiens 0 556
ENST00000485925 ADAMTS13-004 processed_transcript Homo_sapiens 0 219
ENST00000495234 ADAMTS13-007 nonsense_mediated_decay Homo_sapiens 0 924

Loading