C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106498 Pomgnt1-001 ENSMUSG00000028700 10090 + 4:116150518-116159844 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106498
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106498 20.240±3.68 16.727±4.10 23.620±2.94 20.174±4.61 17.697±4.87 12.443±1.93 17.186±3.58 20.343±2.18 6.880±1.63 20.236±0.46 22.600±1.13 17.436±7.76 21.504±4.72 23.967±1.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N5 CIL_0001N5_0002 CGP 4:116123840-116159849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006493 IMP protein O-linked glycosylation
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371984 POMGNT1-001 protein_coding Homo_sapiens 0 3467
ENST00000371992 POMGNT1-002 protein_coding Homo_sapiens 0 2745
ENST00000396420 POMGNT1-201 protein_coding Homo_sapiens 0 1951
ENST00000463030 POMGNT1-007 processed_transcript Homo_sapiens 0 244
ENST00000477114 POMGNT1-009 processed_transcript Homo_sapiens 0 403
ENST00000480972 POMGNT1-006 processed_transcript Homo_sapiens 0 446
ENST00000485714 POMGNT1-004 processed_transcript Homo_sapiens 0 795
ENST00000489985 POMGNT1-003 processed_transcript Homo_sapiens 0 496
ENST00000497439 POMGNT1-008 processed_transcript Homo_sapiens 0 1061

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