C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear transport factor 2-like export factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372106 NXT2-002 ENSG00000101888 9606 + X:109536876-109544690 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372106
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372106 0.515±0.00 1.759±0.00 0.153±0.00 0.412±0.03 1.136±0.36 0.295±0.00 0.437±0.00 1.073±0.55 1.201±0.00 1.416±0.39 0.206±0.16 1.726±1.22 2.068±1.36 6.559±1.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JK CIL_0006JK_0001 CGP X:109372906-109544690
CIL_0007A1 CIL_0007A1_0001 CGP X:109535781-109625172

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006810 IEA transport
GO:0015031 IEA protein transport
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112913 Nxt2-004 protein_coding Mus_musculus 0 688
ENSMUST00000112914 Nxt2-001 protein_coding Mus_musculus 0 682
ENSMUST00000042329 Nxt2-002 protein_coding Mus_musculus 0 682
ENSMUST00000112916 Nxt2-003 protein_coding Mus_musculus 0 682
ENSMUST00000138877 Nxt2-005 retained_intron Mus_musculus 3e-27 128

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