C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: troponin C type 2 (fast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372557 TNNC2-001 ENSG00000101470 9606 - 20:45823214-45833745 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLungOvaryPlacentaTestisENST00000372557
Transcript ID Adrenal Colon Lung Ovary Placenta Testis
ENST00000372557 0.223±0.00 0.839±0.00 1.496±0.00 0.608±0.00 0.593±0.00 0.892±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002K CIL_00002K_0001 CGP 20:45812576-45833745
CIL_0000IO CIL_0000IO_0001 CGP 20:45823214-45843275

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103095 Tnnc2-001 protein_coding Mus_musculus 0 636
ENSMUST00000155443 Tnnc2-002 processed_transcript Mus_musculus 0 283
ENSMUST00000001439 Ube2c-002 protein_coding Mus_musculus 8e-38 161

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