C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ESX homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372588 ESX1-001 ENSG00000123576 9606 - X:104250038-104254933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposePlacentaTestisENST00000372588
Transcript ID Adipose Placenta Testis
ENST00000372588 0.031±0.00 0.289±0.12 10.268±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006A4 CIL_0006A4_0001 CGP X:104166620-104254933
CIL_0006A5 CIL_0006A5_0001 CGP X:104250038-105767829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IMP RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001568 IEA blood vessel development
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0051726 IDA regulation of cell cycle
GO:0060713 IEA labyrinthine layer morphogenesis
GO:0060716 IEA labyrinthine layer blood vessel development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074698 Esx1-002 protein_coding Mus_musculus 0.00000000007 73
ENSMUST00000113066 Esx1-001 protein_coding Mus_musculus 0.00000000007 73
ENSMUST00000027740 Lhx4-001 protein_coding Mus_musculus 0.000002 58

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