C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor A (SII)-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372627 TCEAL3-001 ENSG00000196507 9606 + X:103607906-103609927 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372627
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372627 17.486±0.00 29.483±0.00 0.917±0.00 22.929±17.64 5.253±4.32 11.157±10.17 4.479±4.06 23.405±0.00 2.961±0.00 6.537±4.89 3.982±0.00 45.522±31.13 13.300±1.69 33.348±20.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AM CIL_0002AM_0001 CGP X:103607451-103630953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060904 Tceal3-001 protein_coding Mus_musculus 0 850
ENSMUST00000033783 Tceal6-001 protein_coding Mus_musculus 0 780
ENSMUST00000113100 Tceal3-006 protein_coding Mus_musculus 0 728
ENSMUST00000066819 Tceal5-001 protein_coding Mus_musculus 0 551
ENSMUST00000128040 Tceal3-007 protein_coding Mus_musculus 0 494
ENSMUST00000138047 Tceal3-002 protein_coding Mus_musculus 8.96831e-44 182

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