C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulating synaptic membrane exocytosis 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372851 RIMS4-002 ENSG00000101098 9606 - 20:44751808-44810338 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372851
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372851 0.335±0.00 0.126±0.00 7.392±5.21 0.549±0.00 0.141±0.00 0.024±0.02 0.134±0.00 0.172±0.00 0.161±0.07 0.235±0.13 2.864±0.02 0.056±0.02 7.742±1.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R9 CIL_0007R9_0001 VISTA 20:44272530-44874028
CIL_0003UX CIL_0003UX_0001 CGP 20:44714844-44752313
CIL_0003UW CIL_0003UW_0001 CGP 20:44745780-44810338
CIL_0006IP CIL_0006IP_0002 CGP 20:44751808-44908532

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006836 IEA neurotransmitter transport
GO:0006887 IEA exocytosis
GO:0030054 IEA cell junction
GO:0042391 ISS regulation of membrane potential
GO:0044325 ISS ion channel binding
GO:0048786 TAS presynaptic active zone
GO:0097060 ISS synaptic membrane
GO:2000300 ISS regulation of synaptic vesicle exocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044734 Rims4-001 protein_coding Mus_musculus 0 2189

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