C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, kainate 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373091 GRIK3-001 ENSG00000163873 9606 - 1:36795527-37034125 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000373091
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000373091 0.097±0.00 0.435±0.00 0.012±0.00 3.011±0.36 0.195±0.04 1.038±0.86 0.167±0.09 0.018±0.00 0.223±0.22 0.024±0.01 0.081±0.10 0.008±0.00 0.538±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001640 IDA adenylate cyclase inhibiting G-protein coupled glutamate receptor activity
GO:0004970 ISS:IEA ionotropic glutamate receptor activity
GO:0005234 IBA:IEA extracellular-glutamate-gated ion channel activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0007196 IDA adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway
GO:0007215 IDA glutamate receptor signaling pathway
GO:0007216 IDA G-protein coupled glutamate receptor signaling pathway
GO:0007268 TAS synaptic transmission
GO:0008066 TAS glutamate receptor activity
GO:0015277 IDA kainate selective glutamate receptor activity
GO:0016020 IEA membrane
GO:0030054 IEA cell junction
GO:0030424 ISS axon
GO:0030425 ISS dendrite
GO:0032839 ISS dendrite cytoplasm
GO:0032983 IBA kainate selective glutamate receptor complex
GO:0034220 IEA ion transmembrane transport
GO:0035235 IEA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0042391 ISS regulation of membrane potential
GO:0042734 IBA presynaptic membrane
GO:0043195 ISS terminal bouton
GO:0043204 ISS perikaryon
GO:0045211 IBA postsynaptic membrane
GO:0051967 ISS negative regulation of synaptic transmission, glutamatergic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030676 Grik3-001 protein_coding Mus_musculus 0 3620
ENSDART00000111823 GRIK3-201 protein_coding Danio_rerio 0 1336
ENSDART00000126812 GRIK2 (2 of 2)-201 protein_coding Danio_rerio 0 1007

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