C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, kainate 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030676 Grik3-001 ENSMUSG00000001985 10090 + 4:125490700-125714173 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030676
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030676 0.256±0.21 0.172±0.02 0.365±0.00 12.018±3.03 1.661±0.63 0.628±0.11 0.088±0.02 0.050±0.02 0.014±0.01 0.332±0.19 0.032±0.01 6.885±2.93 0.898±1.46 0.154±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001640 IEA adenylate cyclase inhibiting G-protein coupled glutamate receptor activity
GO:0004970 ISS ionotropic glutamate receptor activity
GO:0005234 IBA extracellular-glutamate-gated ion channel activity
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0007196 IEA adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway
GO:0007215 IEA glutamate receptor signaling pathway
GO:0007216 IEA G-protein coupled glutamate receptor signaling pathway
GO:0015277 IBA kainate selective glutamate receptor activity
GO:0030054 IEA cell junction
GO:0030425 IBA dendrite
GO:0032983 IBA kainate selective glutamate receptor complex
GO:0034220 IBA ion transmembrane transport
GO:0035235 IBA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0042734 IBA presynaptic membrane
GO:0045211 IBA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262895 GRIK5-002 protein_coding Homo_sapiens 0 211
ENST00000301218 GRIK5-001 protein_coding Homo_sapiens 0 211
ENST00000373091 GRIK3-001 protein_coding Homo_sapiens 0 3620
ENST00000373093 GRIK3-002 protein_coding Homo_sapiens 0 3413
ENST00000454993 GRIK5-003 retained_intron Homo_sapiens 0 211
ENST00000462621 GRIK3-003 processed_transcript Homo_sapiens 0 350
ENST00000479620 GRIK3-004 processed_transcript Homo_sapiens 0 252
ENST00000593562 GRIK5-004 protein_coding Homo_sapiens 0 211

Loading