C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373299 STXBP1-002 ENSG00000136854 9606 + 9:127612289-127692716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373299 18.625±0.00 9.644±0.00 0.640±0.00 61.786±52.82 8.486±6.22 9.651±9.03 3.720±3.44 4.807±4.46 1.135±0.15 18.074±16.52 3.256±0.00 17.450±10.98 9.216±1.37 12.266±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0001 VISTA 9:127227593-127829012
CIL_0002C5 CIL_0002C5_0003 CGP 9:127505339-127692716

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 ISS SNARE binding
GO:0002576 IMP platelet degranulation
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0006112 TAS energy reserve metabolic process
GO:0006904 IEA vesicle docking involved in exocytosis
GO:0007268 TAS synaptic transmission
GO:0007269 TAS neurotransmitter secretion
GO:0007412 ISS axon target recognition
GO:0010807 ISS regulation of synaptic vesicle priming
GO:0014047 TAS glutamate secretion
GO:0015031 IEA protein transport
GO:0016188 ISS synaptic vesicle maturation
GO:0016192 IEA vesicle-mediated transport
GO:0017075 ISS syntaxin-1 binding
GO:0019905 IPI syntaxin binding
GO:0031091 IDA platelet alpha granule
GO:0031630 TAS regulation of synaptic vesicle fusion to presynaptic membrane
GO:0032229 ISS negative regulation of synaptic transmission, GABAergic
GO:0035542 TAS regulation of SNARE complex assembly
GO:0042802 ISS identical protein binding
GO:0043234 ISS protein complex
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0050796 TAS regulation of insulin secretion
GO:0070062 IDA extracellular vesicular exosome
GO:0070527 IMP platelet aggregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050000 Stxbp1-001 protein_coding Mus_musculus 0 2466
ENSMUST00000077458 Stxbp1-003 protein_coding Mus_musculus 0 2305
ENSMUST00000113222 Stxbp1-002 protein_coding Mus_musculus 0 1857

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