C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitogen-activated protein kinase associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373498 MAPKAP1-009 ENSG00000119487 9606 - 9:125437394-125672643 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000373498
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000373498 4.572±0.00 7.549±0.00 5.193±0.00 4.590±0.00 2.314±0.00 3.792±0.00 4.395±0.03 7.525±2.02 8.599±1.00 5.175±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080V CIL_00080V_0001 VISTA 9:125333480-125934659
CIL_0008LX CIL_0008LX_0001 VISTA 9:125343868-125945374
CIL_0007LN CIL_0007LN_0001 UCNEbase 9:125397521-126491100

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005546 IDA phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 IDA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005634 IEA nucleus
GO:0005794 IDA Golgi apparatus
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0008543 TAS fibroblast growth factor receptor signaling pathway
GO:0017016 IDA Ras GTPase binding
GO:0019901 IPI protein kinase binding
GO:0021762 IEP substantia nigra development
GO:0031295 TAS T cell costimulation
GO:0031410 IEA cytoplasmic vesicle
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0043325 IDA phosphatidylinositol-3,4-bisphosphate binding
GO:0045087 TAS innate immune response
GO:0046580 IMP negative regulation of Ras protein signal transduction
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0048015 TAS phosphatidylinositol-mediated signaling
GO:0070300 IDA phosphatidic acid binding
GO:0080025 IDA phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147337 Mapkap1-001 protein_coding Mus_musculus 0 2351
ENSMUST00000113126 Mapkap1-201 protein_coding Mus_musculus 0 2327
ENSMUST00000113123 Mapkap1-005 protein_coding Mus_musculus 0 1884
ENSMUST00000124443 Mapkap1-003 protein_coding Mus_musculus 0 1751
ENSMUST00000113124 Mapkap1-004 protein_coding Mus_musculus 0 1517
ENSMUST00000149383 Mapkap1-007 processed_transcript Mus_musculus 0 861
ENSMUST00000138933 Mapkap1-009 processed_transcript Mus_musculus 0 680
ENSMUST00000129633 Mapkap1-011 processed_transcript Mus_musculus 0 272
ENSMUST00000137021 Mapkap1-006 processed_transcript Mus_musculus 0 259
ENSMUST00000141253 Mapkap1-008 processed_transcript Mus_musculus 0 196

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