C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitogen-activated protein kinase associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129633 Mapkap1-011 ENSMUSG00000038696 10090 + 2:34619582-34623919 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000129633
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000129633 13.838±0.00 9.069±2.05 14.754±0.00 16.134±1.88 20.990±2.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LN CIL_0007LN_0002 UCNEbase 2:33746984-34647960
CIL_000960 CIL_000960_0002 VISTA 2:33866778-34467772
CIL_000849 CIL_000849_0002 VISTA 2:33929436-34530577
CIL_0007QH CIL_0007QH_0002 VISTA 2:33935168-34536289
CIL_0007YW CIL_0007YW_0002 VISTA 2:33955333-34557138
CIL_00086D CIL_00086D_0002 VISTA 2:33960195-34561369
CIL_0008I6 CIL_0008I6_0002 VISTA 2:33986508-34588340
CIL_000848 CIL_000848_0002 VISTA 2:34010581-34611103
CIL_0008R5 CIL_0008R5_0002 VISTA 2:34054690-34656547
CIL_000961 CIL_000961_0002 VISTA 2:34056455-34659025
CIL_0008GT CIL_0008GT_0002 VISTA 2:34059231-34660874
CIL_0008Q0 CIL_0008Q0_0002 VISTA 2:34063448-34664810
CIL_0008LX CIL_0008LX_0002 VISTA 2:34155217-34756803
CIL_00080V CIL_00080V_0002 VISTA 2:34162107-34763282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265960 MAPKAP1-201 protein_coding Homo_sapiens 0 272
ENST00000350766 MAPKAP1-007 protein_coding Homo_sapiens 0 272
ENST00000373498 MAPKAP1-009 protein_coding Homo_sapiens 0 272
ENST00000373503 MAPKAP1-008 protein_coding Homo_sapiens 0 272
ENST00000373511 MAPKAP1-015 protein_coding Homo_sapiens 0 272
ENST00000394063 MAPKAP1-202 protein_coding Homo_sapiens 0 272
ENST00000444226 MAPKAP1-004 protein_coding Homo_sapiens 0 272
ENST00000483937 MAPKAP1-001 processed_transcript Homo_sapiens 0 272
ENST00000496063 MAPKAP1-018 processed_transcript Homo_sapiens 0 272
ENST00000496658 MAPKAP1-002 processed_transcript Homo_sapiens 0 274
ENST00000497932 MAPKAP1-016 nonsense_mediated_decay Homo_sapiens 0 272

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