C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gelsolin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373808 GSN-202 ENSG00000148180 9606 + 9:121268102-121332842 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverMuscleOvaryPlacentaENST00000373808
Transcript ID Bladder Brain Colon Kidney Liver Muscle Ovary Placenta
ENST00000373808 6.630±0.00 10.821±0.00 11.209±0.00 2.642±0.00 42.764±0.00 60.936±0.00 140.476±118.24 25.948±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FG CIL_0004FG_0001 CGP 9:121074863-121223014
CIL_0004FH CIL_0004FH_0001 CGP 9:121178137-121332843
CIL_0006N3 CIL_0006N3_0001 CGP 9:121207794-121370304

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005509 TAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005576 ISS extracellular region
GO:0005829 ISS cytosol
GO:0005925 IDA focal adhesion
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0030041 ISS actin filament polymerization
GO:0051014 ISS actin filament severing
GO:0051016 TAS barbed-end actin filament capping
GO:0060271 IMP cilium morphogenesis
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028239 Gsn-001 protein_coding Mus_musculus 0 2852
ENSMUST00000142324 Gsn-004 protein_coding Mus_musculus 0 957
ENSMUST00000124323 Gsn-002 processed_transcript Mus_musculus 0 479
ENSMUST00000139867 Gsn-003 processed_transcript Mus_musculus 0 477

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