C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glucocorticoid modulatory element binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373816 GMEB1-001 ENSG00000162419 9606 + 1:28668732-28719353 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373816
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373816 0.378±0.00 1.363±0.00 0.566±0.10 1.506±0.00 0.871±0.00 0.979±0.85 0.672±0.20 0.568±0.08 1.194±1.16 2.035±1.20 1.102±0.03 1.584±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0001 VISTA 1:28583201-29186892
CIL_0003PX CIL_0003PX_0002 CGP 1:28592200-28719353

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003713 IEA transcription coactivator activity
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105964 Gmeb1-003 protein_coding Mus_musculus 0 2401
ENSMUST00000168553 Gmeb1-201 protein_coding Mus_musculus 0 2366
ENSMUST00000030733 Gmeb1-002 protein_coding Mus_musculus 0 2366
ENSMUST00000105965 Gmeb1-001 protein_coding Mus_musculus 0 2366
ENSMUST00000131763 Gmeb1-006 retained_intron Mus_musculus 0 398
ENSMUST00000125534 Gmeb1-004 retained_intron Mus_musculus 0 359
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000002 64
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000009 58

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