C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gelsolin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373818 GSN-001 ENSG00000148180 9606 + 9:121299793-121332842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373818
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373818 1278.430±0.00 301.425±0.00 6.922±0.00 97.437±0.00 543.820±488.54 423.315±395.74 210.050±177.92 108.620±0.00 66.837±56.62 172.969±151.86 212.972±0.00 160.533±103.30 59.657±33.95 192.003±139.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FG CIL_0004FG_0001 CGP 9:121074863-121223014
CIL_0004FH CIL_0004FH_0001 CGP 9:121178137-121332843
CIL_0006N3 CIL_0006N3_0001 CGP 9:121207794-121370304

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0003779 IEA actin binding
GO:0005509 TAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005576 ISS extracellular region
GO:0005615 IEA extracellular space
GO:0005829 ISS cytosol
GO:0005925 IDA focal adhesion
GO:0006915 TAS apoptotic process
GO:0006921 TAS cellular component disassembly involved in execution phase of apoptosis
GO:0007568 IEA aging
GO:0008154 IEA actin polymerization or depolymerization
GO:0014003 IEA oligodendrocyte development
GO:0015629 IEA actin cytoskeleton
GO:0016192 IEA vesicle-mediated transport
GO:0030027 IEA lamellipodium
GO:0030041 ISS actin filament polymerization
GO:0030155 IEA regulation of cell adhesion
GO:0042060 IEA wound healing
GO:0042246 IEA tissue regeneration
GO:0043234 IEA protein complex
GO:0045471 IEA response to ethanol
GO:0048015 IEA phosphatidylinositol-mediated signaling
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051014 ISS actin filament severing
GO:0051016 TAS barbed-end actin filament capping
GO:0051593 IEA response to folic acid
GO:0060271 IMP cilium morphogenesis
GO:0070062 IDA extracellular vesicular exosome
GO:0071276 IEA cellular response to cadmium ion
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028239 Gsn-001 protein_coding Mus_musculus 0 2905
ENSMUST00000142324 Gsn-004 protein_coding Mus_musculus 0 955
ENSMUST00000124323 Gsn-002 processed_transcript Mus_musculus 0 508
ENSMUST00000139867 Gsn-003 processed_transcript Mus_musculus 0 477

Loading