C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin 3, node of Ranvier (ankyrin G)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373827 ANK3-004 ENSG00000151150 9606 - 10:60028401-60733490 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000373827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000373827 0.223±0.00 1.266±0.00 4.515±0.00 7.950±0.00 1.204±0.10 4.499±2.17 9.287±7.02 4.133±0.00 0.912±0.18 5.079±2.67 1.404±0.20 1.595±0.37 1.841±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002W5 CIL_0002W5_0002 CGP 10:59788763-60733490
CIL_0000GY CIL_0000GY_0002 CGP 10:60026298-60794852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000281 IMP mitotic cytokinesis
GO:0005200 IMP structural constituent of cytoskeleton
GO:0005515 IPI:IEA protein binding
GO:0005764 IEA lysosome
GO:0005783 TAS endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 ISS plasma membrane
GO:0005923 IDA tight junction
GO:0007009 IMP plasma membrane organization
GO:0007016 TAS cytoskeletal anchoring at plasma membrane
GO:0007165 IEA signal transduction
GO:0007409 ISS axonogenesis
GO:0008092 ISS cytoskeletal protein binding
GO:0009925 IDA basal plasma membrane
GO:0009986 ISS cell surface
GO:0010628 ISS positive regulation of gene expression
GO:0010765 ISS positive regulation of sodium ion transport
GO:0014704 ISS intercalated disc
GO:0014731 ISS spectrin-associated cytoskeleton
GO:0016323 IDA basolateral plasma membrane
GO:0016328 IDA lateral plasma membrane
GO:0019228 ISS neuronal action potential
GO:0030315 ISS T-tubule
GO:0030507 ISS spectrin binding
GO:0030674 ISS protein binding, bridging
GO:0033268 ISS node of Ranvier
GO:0042383 IDA sarcolemma
GO:0043001 IMP Golgi to plasma membrane protein transport
GO:0043034 TAS costamere
GO:0043194 ISS axon initial segment
GO:0043266 ISS regulation of potassium ion transport
GO:0044325 ISS ion channel binding
GO:0045184 IMP establishment of protein localization
GO:0045296 ISS cadherin binding
GO:0045838 ISS positive regulation of membrane potential
GO:0071709 IMP membrane assembly
GO:0072659 IMP protein localization to plasma membrane
GO:0072660 IGI maintenance of protein location in plasma membrane
GO:0072661 IMP protein targeting to plasma membrane
GO:1900827 ISS positive regulation of membrane depolarization during cardiac muscle cell action potential
GO:2000651 ISS positive regulation of sodium ion transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092432 Ank3-204 protein_coding Mus_musculus 0 5681
ENSMUST00000092431 Ank3-203 protein_coding Mus_musculus 0 5555
ENSMUST00000182992 Ank3-005 protein_coding Mus_musculus 0 4798
ENSMUST00000182474 Ank3-003 retained_intron Mus_musculus 0 3302
ENSMUST00000182692 Ank3-030 protein_coding Mus_musculus 0 3230
ENSMUST00000092434 Ank3-205 protein_coding Mus_musculus 0 2957
ENSMUST00000182884 Ank3-001 protein_coding Mus_musculus 0 2957
ENSMUST00000054167 Ank3-202 protein_coding Mus_musculus 0 2885
ENSMUST00000183148 Ank3-015 protein_coding Mus_musculus 0 2885
ENSMUST00000183169 Ank3-014 protein_coding Mus_musculus 0 2885
ENSMUST00000182155 Ank3-011 protein_coding Mus_musculus 0 2885
ENSMUST00000182972 Ank3-016 protein_coding Mus_musculus 0 2743
ENSMUST00000182029 Ank3-022 protein_coding Mus_musculus 0 2736
ENSMUST00000092433 Ank3-018 protein_coding Mus_musculus 0 2736
ENSMUST00000181974 Ank3-024 protein_coding Mus_musculus 0 2449
ENSMUST00000047061 Ank3-201 protein_coding Mus_musculus 0 2172
ENSMUST00000182439 Ank3-027 protein_coding Mus_musculus 0 2172
ENSMUST00000182437 Ank3-026 protein_coding Mus_musculus 0 1845
ENSMUST00000183074 Ank3-021 protein_coding Mus_musculus 0 1845
ENSMUST00000183261 Ank3-020 protein_coding Mus_musculus 0 1845
ENSMUST00000182269 Ank3-019 protein_coding Mus_musculus 0 1845
ENSMUST00000182795 Ank3-025 protein_coding Mus_musculus 0 1796
ENSMUST00000182687 Ank3-023 retained_intron Mus_musculus 0 1690
ENSMUST00000182207 Ank3-031 protein_coding Mus_musculus 0 1526
ENSMUST00000182762 Ank3-028 retained_intron Mus_musculus 0 1026
ENSMUST00000182194 Ank3-013 retained_intron Mus_musculus 0 1022
ENSMUST00000182373 Ank3-012 retained_intron Mus_musculus 0 918
ENSMUST00000182993 Ank3-009 protein_coding Mus_musculus 0 909
ENSMUST00000183240 Ank3-032 protein_coding Mus_musculus 0 857
ENSMUST00000182557 Ank3-010 protein_coding Mus_musculus 0 817
ENSMUST00000182683 Ank3-034 protein_coding Mus_musculus 0 678
ENSMUST00000182606 Ank3-037 retained_intron Mus_musculus 0 597
ENSMUST00000183001 Ank3-036 retained_intron Mus_musculus 0 516
ENSMUST00000182665 Ank3-029 nonsense_mediated_decay Mus_musculus 0 516
ENSMUST00000183023 Ank3-006 protein_coding Mus_musculus 0 516
ENSMUST00000186247 Ank3-038 protein_coding Mus_musculus 0 510
ENSMUST00000183075 Ank2-018 retained_intron Mus_musculus 0 475
ENSMUST00000182662 Ank2-026 protein_coding Mus_musculus 0 475
ENSMUST00000182764 Ank2-020 protein_coding Mus_musculus 0 475
ENSMUST00000182726 Ank2-027 protein_coding Mus_musculus 0 475
ENSMUST00000044443 Ank2-017 protein_coding Mus_musculus 0 475
ENSMUST00000182112 Ank2-028 protein_coding Mus_musculus 0 475
ENSMUST00000182704 Ank2-001 protein_coding Mus_musculus 0 475
ENSMUST00000182078 Ank2-022 protein_coding Mus_musculus 0 470
ENSMUST00000182594 Ank2-013 protein_coding Mus_musculus 0 407
ENSMUST00000182064 Ank2-008 protein_coding Mus_musculus 0 407
ENSMUST00000182779 Ank2-007 protein_coding Mus_musculus 0 407
ENSMUST00000182588 Ank2-014 protein_coding Mus_musculus 0 407
ENSMUST00000182239 Ank3-033 retained_intron Mus_musculus 0 359
ENSMUST00000183082 Ank3-035 protein_coding Mus_musculus 0 279
ENSMUST00000185582 Ank3-039 protein_coding Mus_musculus 0 231
ENSDART00000088106 ank3a-201 protein_coding Danio_rerio 9.99995e-41 174
ENSDART00000150037 ank3a-005 protein_coding Danio_rerio 9.99995e-41 174
ENSMUST00000182977 Ank2-021 protein_coding Mus_musculus 2e-33 150
ENSMUST00000182025 Ank2-032 nonsense_mediated_decay Mus_musculus 8e-22 111

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