C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin 2, brain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182064 Ank2-008 ENSMUSG00000032826 10090 - 3:126923325-127225932 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverLungOvaryTestisENSMUST00000182064
Transcript ID Adipose Adrenal Breast Colon Liver Lung Ovary Testis
ENSMUST00000182064 0.771±0.13 0.840±0.14 0.735±0.18 0.626±0.00 0.060±0.00 0.282±0.00 2.830±0.00 4.118±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038U CIL_00038U_0002 CGP 3:126596302-127499259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007165 IEA signal transduction
GO:0008104 IMP protein localization
GO:0015459 IMP potassium channel regulator activity
GO:0030018 IDA Z disc
GO:0031430 IDA M band
GO:0033292 IMP T-tubule organization
GO:0034613 IMP cellular protein localization
GO:0042981 RCA regulation of apoptotic process
GO:0048471 IDA perinuclear region of cytoplasm
GO:0060048 IMP cardiac muscle contraction
GO:0072659 IMP protein localization to plasma membrane
GO:0072661 IGI protein targeting to plasma membrane
GO:0086036 IGI regulation of cardiac muscle cell membrane potential
GO:2001257 IMP regulation of cation channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000021693 CR388002.1-201 protein_coding Danio_rerio 0 1358
ENST00000264366 ANK2-026 protein_coding Homo_sapiens 0 4220
ENST00000280772 ANK3-001 protein_coding Homo_sapiens 0 411
ENST00000355288 ANK3-002 protein_coding Homo_sapiens 0 407
ENST00000357077 ANK2-001 protein_coding Homo_sapiens 0 6059
ENST00000373827 ANK3-004 protein_coding Homo_sapiens 0 407
ENST00000394537 ANK2-002 protein_coding Homo_sapiens 0 6643
ENST00000502701 ANK2-025 retained_intron Homo_sapiens 0 645
ENST00000503271 ANK2-009 protein_coding Homo_sapiens 0 4516
ENST00000503366 ANK3-005 protein_coding Homo_sapiens 0 407
ENST00000503423 ANK2-010 protein_coding Homo_sapiens 0 2386
ENST00000504415 ANK2-022 protein_coding Homo_sapiens 0 451
ENST00000504454 ANK2-005 protein_coding Homo_sapiens 0 5873
ENST00000504887 ANK2-018 processed_transcript Homo_sapiens 0 606
ENST00000505342 ANK2-011 protein_coding Homo_sapiens 0 588
ENST00000506722 ANK2-004 protein_coding Homo_sapiens 0 3821
ENST00000508007 ANK2-019 retained_intron Homo_sapiens 0 459
ENST00000508449 ANK3-022 retained_intron Homo_sapiens 1e-34 150
ENST00000508613 ANK2-013 protein_coding Homo_sapiens 0 603
ENST00000509550 ANK2-006 protein_coding Homo_sapiens 0 2202
ENST00000510275 ANK2-008 protein_coding Homo_sapiens 0 1066
ENST00000511380 ANK2-014 protein_coding Homo_sapiens 0 302
ENST00000514160 ANK2-017 retained_intron Homo_sapiens 0 523
ENST00000514246 ANK2-012 processed_transcript Homo_sapiens 0 204
ENST00000514960 ANK2-007 protein_coding Homo_sapiens 0 1541
ENST00000515034 ANK2-015 protein_coding Homo_sapiens 0 758
ENST00000515644 ANK2-016 retained_intron Homo_sapiens 0 446
ENST00000610321 ANK3-034 protein_coding Homo_sapiens 0 407
ENST00000612754 ANK2-201 protein_coding Homo_sapiens 0 952
ENST00000616444 ANK3-033 protein_coding Homo_sapiens 0 407
ENST00000618374 ANK3-201 protein_coding Homo_sapiens 0 407

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