C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374675 SLC39A7-002 ENSG00000112473 9606 + 6:33200826-33204439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374675
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374675 16.157±0.00 12.188±0.00 4.951±0.00 6.689±4.23 15.713±9.24 12.407±2.24 4.693±3.32 19.094±13.07 17.740±9.83 17.461±12.32 4.435±1.93 9.418±3.61 42.420±7.57 12.416±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PH CIL_0001PH_0002 CGP 6:33162681-33200688

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0006829 IEA zinc ion transport
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169397 Slc39a7-201 protein_coding Mus_musculus 0 1511
ENSMUST00000025186 Slc39a7-001 protein_coding Mus_musculus 0 1424
ENSMUST00000170491 Slc39a7-003 retained_intron Mus_musculus 0 1050
ENSMUST00000171872 Slc39a7-004 protein_coding Mus_musculus 0 819

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