C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374677 SLC39A7-001 ENSG00000112473 9606 + 6:33200873-33204439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000374677
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000374677 26.092±0.00 20.131±0.00 3.123±0.00 7.321±5.22 13.135±6.24 10.417±2.47 6.876±4.76 16.441±13.50 7.841±5.68 8.481±2.86 19.923±10.30 23.572±4.27 17.630±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PH CIL_0001PH_0002 CGP 6:33162681-33200688

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0006829 IEA zinc ion transport
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025186 Slc39a7-001 protein_coding Mus_musculus 0 1447
ENSMUST00000169397 Slc39a7-201 protein_coding Mus_musculus 0 1424
ENSMUST00000170491 Slc39a7-003 retained_intron Mus_musculus 0 1050
ENSMUST00000171872 Slc39a7-004 protein_coding Mus_musculus 0 737

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